Zymo-Seq RiboFree Total RNA Library Kit
R3000 / R3003
Zymo-Seq RiboFree Total RNA Library Kit
- The Fastest & Easiest Total RNA-Seq Library Kit: Prepare stranded, RiboFree libraries from total RNA in 3.5 hours.
- Compatible with Any Organism: Probe-free technology depletes rRNA & Globin from any RNA source.
- The Most Accurate: Eliminate bias from rRNA depletion.
Zymo-Seq RiboFree Total RNA-Seq Library Kit is the fastest, easiest RNA-Seq library prep kit available to make stranded, total RNA libraries. The automation-friendly protocol minimizes hands-on time to generate sequencer-ready, stranded, indexed libraries depleted of rRNA and globin in as little as 3.5 hours.
Depletion of ribosomal RNAs (which can comprise as much as 90% of a total RNA sample) is completely integrated into the workflow, using a novel, probe-free technology that removes rRNA, globin, or any other over-abundant, repetitive transcript from any sample type or species.
RiboFree Universal Depletion is validated across biological kingdom and phyla, including human, rodent, plant, and various prokaryotes, as well as RNA from a wide range of sample types including cells, tissue, FFPE tissues, and whole blood, eliminating the need to select sample-specific modules for different sample types. Just one total RNA-Seq library prep kit to deplete them all.
Because the RiboFree Universal Depletion is probe-free, researchers using the Zymo-Seq RiboFree Total RNA Library Kit will avoid transcriptome profiling bias found in other methods. High concentrations of rRNA-binding oligonucleotides used in probe-based approaches also bind to a significant number of non-ribosomal targets. As much as 20% of the 20,000 protein-coding genes in the human genome are significantly biased by these methods.
In contrast, the probe-free depletion developed by Zymo Research uses only abundant pre-existing transcripts for mismatch-free enzymatic removal of rRNA and globin, resulting in minimal off-target effects as low as 1.8% in all protein-coding transcripts.
This total RNA-Seq library prep kit’s protocol is fragmentation-free and works with up to 2 ug of undepleted total RNA, down to 50 ng of undepleted total RNA, or as little as 5 ng of ribosome-depleted RNA samples. Pre-mixed reagents are ready-to-use at every step, eliminating the need for manual master-mix preparation. Everything needed to make sequencing-ready libraries, including indexing primers, SPRI beads, and magnetic bead stand are included in the kit. It’s RNA-Seq made simple.
|Equipment Required||Thermocycler, magnet stand*, and microcentrifuge.
*for a complimentary magnet stand, please contact email@example.com
|Input Quality||Ensure RNA A260/A280 and A260/A230 ratios are ≥ 1.8, DNA-free, and PCR inhibitor-free for high-fidelity cDNA transcription and depletion|
|Maximum Input||5 µg|
|Minimum Input||100 ng|
|Processing Time||As little as 3.5 hours (RNA to indexed library)|
|Recommended Input||500 ng|
|Sample Input Material||RNA from any species|
|Sequencing||Libraries are stranded and compatible with all Illumina® sequencing platforms. The Read 1 sequence will be antisense to the RNA molecule of origin.|
Q1: Do you sell the ribo depletion separately?
Yes, please contact technical support firstname.lastname@example.org for ordering information.
Q2: Will this kit work with prokaryotes?
Yes, this kit will work with any organism. As long as your sample has rRNA, this kit will work.
Q3: My sample is lower than 100 ng, will this kit still work?
Lower sample inputs will require a longer incubation time during RiboFree Universal Depletion. Please refer to Appendix B for suggestions
“This is probably the best RNA-seq library preparation kit I’ve used (and I have used many). It is very simple and gives clean, reproducible results at a very affordable price. I would highly recommend this product to anyone looking for a quicker and easier library preparation kit. Zymo has never let me down.”
- Galina (City of Hope)
“I think this kit is faster and simpler to do than the Truseq RNA library prep kit. It was easy enough that I tried it once and got a nice library prep, with a high concentration and I did not make any mistakes in my first try! I will definitely buy this kit and recommend it to others without a doubt.”
- Rafael (UC Berkeley)
“This RNA Library Kit was easy to use and recovered good efficiency.”
- Veronica L (CICY Mexico)
|E2003||ZymoTaq PreMix||(50 Rxns.) (2 x 625 µl)||$73.00|
|E2004||ZymoTaq PreMix||(200 Rxns.) (8 x 625 µl)||$228.00|
|W1001-10||DNase/RNase-Free Water||10 ml||$19.00|
|W1001-1||DNase/RNase-Free Water||1 ml||$10.00|
|D4084-50||Select-a-Size MagBead Set||50 ml||$650.00|
|D4084-10||Select-a-Size MagBead Set||10 ml||$175.00|
|D3004-4-10||DNA Elution Buffer||10 ml||$14.00|
|D3004-4-50||DNA Elution Buffer||50 ml||$32.00|
|3DP-1002||PCR Strip MagStand||1 unit||$55.00|
|R3001||Zymo-Seq RiboFree Universal cDNA Kit||12 Preps||$495.00|
|D3008||Zymo-Seq UDI Primer Set (Indexes 1-12)||12 indexes||$195.00|
|D3096||Zymo-Seq UDI Primer Plate (Indexes 1-96)||96 Indexes||$495.00|
|R3004-1-48||Zymo-Seq Wash Buffer||48 mL||$105.00|
|R3004-1-6||Zymo-Seq Wash Buffer||6 mL||$18.00|